Faq t2b: Difference between revisions
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qsub -q localgrid -o script.stdout -e script.stderr [-l walltime=<HH:MM:SS>] myscript.sh | qsub -q localgrid -o script.stdout -e script.stderr [-l walltime=<HH:MM:SS>] myscript.sh | ||
=== MadGraph taking all the cores of a workernode === | |||
The default settings for MadGraph is to take all the available cores. This kills the site. | |||
If the number of cores used by MadGraph is higher than 1, this needs to be asked to the job scheduler with the following directive added to qsub: | |||
<pre> -lnodes=1:ppn=2 </pre> | |||
Where ppn is the number of cores you request. <br> | |||
To tell MadGraph the number of cores he can take per job, use the following recipe: | |||
<pre> | |||
./bin/mg5_aMC | |||
set nb_core 1 #or 2 or whatever you want | |||
save options | |||
</pre> | |||
Note 'nb_core' and 'ppn' must alway be the same value! | |||
=== Access internet '''faster''' from the UIs === | === Access internet '''faster''' from the UIs === |
Revision as of 06:47, 13 September 2017
List of the UIs / mX machines:
- m0 , m1 , m2 , m3 => 10 minutes of CPU time per process
- m5 , m6 , m7 , m8 , m9 => 5 hours of CPU time per process
Keep ssh connection to UI open:
Add option ' -o ServerAliveInterval=100 ' to your ssh command
Send a job to the local cluster:
qsub -q localgrid -o script.stdout -e script.stderr [-l walltime=<HH:MM:SS>] myscript.sh
MadGraph taking all the cores of a workernode
The default settings for MadGraph is to take all the available cores. This kills the site. If the number of cores used by MadGraph is higher than 1, this needs to be asked to the job scheduler with the following directive added to qsub:
-lnodes=1:ppn=2
Where ppn is the number of cores you request.
To tell MadGraph the number of cores he can take per job, use the following recipe:
./bin/mg5_aMC set nb_core 1 #or 2 or whatever you want save options
Note 'nb_core' and 'ppn' must alway be the same value!
Access internet faster from the UIs
Since our bandwidth with internet is limited and extremely expensive, you need to use the another one:
- For http/https traffic (uses the university traffic)
export http_proxy=http://qproxy.wn.iihe.ac.be:3128 export https_proxy=http://qproxy.wn.iihe.ac.be:3128
- For ssh traffic, through a server you have access to (example using CERN)
- edit your .ssh/config file ===>
host github.com ProxyCommand ssh MYUSERNAME@lxplus.cern.ch nc github.com 22 User MYUSERNAME